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Technologies To The People® Business Gene-Department, Chromosome tttp©

tttp Map Genethon Map Method In Situ Human Gene Mouse Chr. tttp Gene Mouse Locus Cross Homology Group
1p36 TXGP1 4 Ox40 79.4 b 1
stSG1939 0-6 R 1p36-p31.2 GNB1 4 Gnb1 79.4 b 1
C 1p36.3 CDC2L1 4 Cdc2l1 79.4 1
C,P,G 1p36.3 ENO1 4 Eno1 79.0 1
WI-12099 16-22 R 1 10958(u) 4 AA165858(a) 78.8 a 1
C,G 1p36.3 PGD 4 Pgd 77.6 1
SHGC31494 22-36 R,C,P 1p36.3-p36.2 TNFR2(b) 4 Tnfr2(b) 75.5 b 1
SHGC-9861 22-36 R,P 1p36.2 CD30 4 Cd30 75.8 1
SHGC-30062 22-32 R 1p36.3-p36.2 PLOD 4 Plod 76.5 1
C,P,G 1p36.2 NPPA 4 Nppa 76.5 a, b 1
1p36.3-p36.2 NPPB 4 Nppb 76.5 1
M59371 36-49 R 1 ECK 4 Eck 73.2 1
C 1p36.1 HSPG2 4 Hspg2 71.4 1
G 1p35 ALPL 4 Akp2 70.2 a 1
C,P 1p36.1 PAX7 4 Pax7 69.0 1
G 1p35-p34 FUCA1 4 Fuca 67.2 1
1p35 ELP1 4 Elp1 67.2 1
WI-7909 39-54 R 1p35 PLA2G2A 4 Pla2g2a 66.6 1
1p35 PLA2G2C 4 Pla2g2c 66.6 1
1p35 PLA2G5 4 Pla2g5 66.6 1
1p36.3-p34.3 HTR1D 4 Htr1da 66.2 1
WI-16767 49-52 R 1p36.3-p34.1 C1QB 4 C1qb 66.1 1
stSG8106 49-52 R 1 C1QC 4 C1qc 66.1 1
SHGC-13801 50-52 R 1 C1QA 4 C1qa 66.1 1
1p36.1 ID3 4 Idb3 66.0 b 1
C 1p36.1-p35 LAP18 4 Lag 65.7 b 1
1p36 AML2 4 Cbfa3 65.7 1
SHGC-9621 52-54 R 1p36.1 ERK 4 Erk 65.7 1
SHGC-11459 50-54 R 1p36.1-p35 HMGCL 4 Hmgcl 65.6 1
1p36.3-p32 AGRN 4 Agrn S 1
1p36.3-p36.2 PLOD 4 Plod 65.0 1
1p36.1-1p34.3 OPRD1 4 Oprd1 64.8 1
1p36.1-p35 MFAP2 4 Magp S 1
C,G 1p36.1 FGR 4 Fgr 64.6 b 1
1p36.2-p35 SLC9A1 4 Slc9a1 64.6 1
G 1p36.1-p35 HMG17 4 Hmg17 62.2 1
1p36-q31 FABP3 4 Fabph1 61.0 1
1p IL14 4 Il14 59.0 a 1
1p35-p32 LCK 4 Lck 59.0 a, b, 1
1p34.3-p32.3 COL8A2 4 Col8a2 57.2 a 1
1p33-34 GRIK3 4 Grik3 57.7 a 1
1p36-q12 GJA4 4 Gja4 57.6 b 1
1p35-p34.3 CSFGR 4 Csfgr 57.5 b 1
1p34 MPL 4 Mpl 56.5 c 1
WI-7196 63-73 R,G 1p34 MYCL 4 Lmyc1 55.0 a, b 1
SGC35672 66-73 R 1p32.3-p33 COL9A2 4 Col9a2 53.0 1
1p35-p34 GUCA2 4 Guca2 52.9 1
G 1p35-p31.3 SLC2A1 4 Glut1 52.0 a, b, 1
1 SSBP 4 Ssbp 52.0 b 1
1p32-p22 IPP 4 Ipp 51.5 1
1p34 UROD 4 Urod 50.6 1
1p34 AK2 4 Ak2 S 1
1p31 TAL1 4 Tal1 49.5 b 1
R 1p31 C8B 4 C8b 49.4 b 1
1p32-p22.1 D1S85 4 D4H1S85 48.1 1
1p31 PDE4B 4 Pde4b(g) 46.8 1
1p32.3-31.3 JAK1 4 Jak1 46.3 1
WI-9183 95-102 R,G 1p32-33 PGM1 4 Pgm2 45.5 b 1
1p34-p12 CYP4B1 4 Cyp4a 45.4 b 1
1p32-p31 JUN 4 Jun 44.6 a, b 1
SHGC-15189 97-99 R 1 12172(u) 4 AA107359(a) 43(g) a 1
SHGC-12893 100-106 R 1p31.2 PTGER3 3 Ptgerep3 82.0 a 2
1p31 RPE65 3 Rpe65 78.1 2
SHGC-12571 106-110 R 1p31.1 PTGFR 3 Ptgfr 75.8 a 2
1p22 GFI1 5 Gfi1 56.0 b 3
WI-9122 129-132 R 1 1649(u) 5 AA124718(a) 56.0 a 3
25505 131 R 1 25505(u) 5 AA155193(a) 56.0 a 3
1p22-p21 PXMP1 3* Pxmp1 56.6 b 4
UTR-9667 140-143 R 1 COL11A 3* Col11a1 53.1 4
1p31 VCAM1 3* Vcam1 50.8 b 4
G 1p22-p21 F3 3* Cf3 50.0 4
G 1p21 AMY2B 3* Amy2 50.0 a, b 4
SGC32938 140-143 R 1p21 AMY1 3* Amy1 50.0 4
A006D12 146-147 R 1 AMPD2 3* Ampd2 50(y) 4
1p21 KCNC4 3* Kcnc4 49(y) 4
SHGC-9869 146-151 R 1p13.3 KCNA3 3* Kcna3 49(y) b 4
1p13 GNAT2 3* Gnat2 49.0 b 4
WI-9136 146-149 R 1p13 GNAI3 3* Gnai3 48.8 b 4
WI-9116 146-149 R 1p13-21 CSF1 3* Csfm 48,8 b 4
SHGC-12404 146-151 R 1p13-p12 CD53 3* Cd53 48.5 a,b 4
SHGC-141 146-151 R,P 1p13-p12 RAP1A 3* Rap1a 48.5 a,b 4
P,G 1p13 TSHB 3* Tshb 48.5 a, b, P 4
P,G 1p13 NRAS 3* Nras 48.5 a, b, P 4
SHGC-10159 153 R,P,G 1p13 NGFB 3* Ngfb 48.5 a, b, P 4
1p13 AMPD1 3* Ampd1 48.5 a, P 4
A001Z44 154-156 R,P 1p13 ATP1A1 3* Atpla1 48.4 a, P 4
D1S3476 156-160 R 1p13 CD2 3* Cd2 47.8(y) a, P 4
stSG98 156-160 R 1pter-q12 ARNT 3* Arnt 48.0 4
1q FCGR1 3* Fcgr1(g) 46.5(y) a 4
SHGC-10708 159-170 R, P 1q22-23 CD1 3* Cd1 46(y) a, P 4
1q23-31 NTRK1 3* Ntrk1 46.0 a, b 4
1q21 PKLR 3* Pklr 46.0 a 4
P,G 1q21-q23 MUC1 3* Muc1 44.8(g) a 4
1p36-q12 GJA5 3* Gja5 45.6 b 4
SGC35274 156-160 R 1p11-13 HSDB3 3* Hsd3b 45.3 4
C,P 1q12-21 H3F2 3* Hist2 45.2 b 4
M81457 159-164 R,C,P 1q21-q22 S100A4 3* Capl(g) 43.6 4
C,P 1q21-q25 S100A6 3* Cacy(g) 43.6 a 4
SGC34987 156-160 R 1q21 MCL1 3* Mcl1 43.6 a 4
WI-7217 160-164 R,C,P 1q21 FLG 3* Flg 42.6 b 4
1q24-q31 FPSL 3* Fpsl-rs1 42.6 a 4
1q BGLAP 3* Bglap1 42.6 a, c 4
P 1q21-q23 THBS3 3* Thbs3 42.6 a 4
M61120 159-164 R,C,P 1q21 Lor 3* Lor 42.1 b 4
1q21 IL6R 3* Il6r 42.1 b 4
P 1q21 GBA 3* Gba 41.7 a 4
1q22-24 SKV 4 Ski 78.9 a, b ?
SHGC-9827 159-170 R,P,G 1q21-23 SPTA1 1 Spna1 95.2 a, b, P 5
M11725 170-173 R,P,G 1q21-q23 CRP 1 Crp 94.2 a, P 5
SHGC-10941 170-172 R,P 1q21-q23 APCS 1 Sap 94.2 a, P 5
SHGC-12658 170-181 R,P 1q21-q23 FCER1A 1 Fcer1a 94.2 a, P 5
SGC31641 170-173 R,P,G 1q21-q22 ATP1A2 1 Atp1a2 94.2 a, P 5
1q21-q23 USF1 1 Usf1 93.5 5
1q22 NHLH1 1 Nhlh1 93.4 5
P 1q21.3-q22 LY9 1 Ly9 93.3 a, P 5
WI-8971 170-173 R,P 1q21.3-q22 CD48 1 Cd48 93.3 a, P 5
1q22-q23 USF1 1 Usf1 S 5
SHGC-12422 175-179 R,P 1q23 FCER1G 1 Fcer1g 93.3 a, P 5
SHGC-017 175-179 R,P,G 1q21-q23 APOA2 1 Apoa2 92.6 a, c, P 5
P 1q21-q23 MPZ 1 Mpp 92.4 a, P 5
SGC35267 173-181 R,P 1q21-23 CD32 1 Fcgr2 92.3 a, P 5
stSG71 173-181 R,P,G 1q21-q23 FCGR3A,B 1 Fcgr3 92.3 a, P 5
1q SYT2 1 Syt2 90.0 5
WI-15938 173-181 R,P 1q23-25 RXRG 1 Rxrg 88.1 a 5
P 1q23-q25 PBX1 1 Pbx1 88.1 a, b 5
P 1q22-q25 POU2F1 1 Pou2f1 87.2 a, b, P 5
J04132 183-186 R,P 1q22-q25 CD3z 1 Cd3z 87.2 a, P 5
SGC35495 187-193 R 1 LPTN 1 Lptn 87.0 5
P 1q22-q25 ATP1B1 1 Atp1b1 86.8 a, P 5
M14335 186-193 R,P 1q21-q25 F5 1 Cf5 86.6 a, P 5
SHGC-17253 186-193 P 1q21-q25 SELP 1 Selp 86.6 a, P 5
WI-7045 187-193 R,P 1q21-q25 SELL 1 Sell 86.6 a, P 5
M30640 186-193 R,P 1q22-q25 SELE 1 Sele 86.6 a, b, P 5
SHGC-11872 193-196 R,P 1q23 APT1LG1 1 Fasl 85.0 a, P 5
WI-7792 193-197 R,P 1q23 OX40L 1 Ox40l 84.9 a, b, P 5
atSG1405 197-199 R,P,G 1q23-q25.1 AT3 1 At3 84.6 a, b, P 5
1q24-q25 ABLL 1 Abll 82.1 a 5
1q25 SOAT 1 Acact 81.6 5
WI-8057 199-203 R,G 1q31 LAMC1 1 Lamc1 81.1 a, b 5
1q31 LAMC2 1 Lamc2 80.1 5
WI-7142 205-208 R 1q25.2-q25.3 PTGS2 1 Ptgs2 76.2 5
stSG402 204-208 R 1cen-q32 NCF2 1 Ncf2 76.1 5
SGC31488 213-216 R 1q32 HF1 1 Cfh 74.1 a 5
1q31-32 PTPRC 1 Ptprc 74.1 a, b 5
1q SYT2 1 Syt2 73.5 5
1q31-q41 MYOG 1 Myog 72.3 b 5
1q25 PEPC 1 Pep3 71.0 5
1q25-q32 ATP2B2 1 Atp2b2 70.3 a 5
G 1q32 or 1q41 REN 1 Ren 69.9 a, b 5
1q32 EPRS 1 Qprs S 5
SHGC-11068 218-219 R 1q32 CACNL1A3 1 Cchl1a3 69.9 5
1 IL10 1 Il10 69.9 b 5
SHGC-11123 224-228 R,P,G 1q32 DAF 1 Daf 67.6 a 5
SHGC-9971 224-232 R,P 1q32 C4BP 1 C4bp 67.6 a 5
M26021 224-232 R,P,G 1q32 CR2 1* Cr2 106.6 a, P 6
X14358 224-232 R,P,G 1q32 CR1 1* Crry 106.6 a 6
WI-7685 225-232 R,P 1q32 CD34 1* Cd34 106.6 a, P 6
1q32 LAMB3 1* Lamb3 104.0 6
SHGC-31006 235-237 R 1q41-q42.1 HLX1 1* Hlx 101.5 b 6
WI-7576 242-246 R 1q41 TGFB2 1* Tgfb2 101.5 a, b 6
1q31-qter CHML 1* Chml 99.7 6
SGC30345 246-249 R,G 1q41-q42 ADPRT 1* Adprp 98.5 a 6
1p11-qter EPHX 1* Eph1 98.5 a 6
1q42.11-q42.13 RN5S 8 Rn5s S 7
WI-8965 249-251 R.P 1q41-qter AGT 8 Agt 68.0 7
1q42-43 RAB4A 8 Rab4a 67.5 7
SHGC-12727 246-256 R,P 1q42.1-q42.3 ACTA1 8 Actsk 67.0 a, b, c 7
SHGC-32758 246-272 R 1q34-1q43 LYST 13 Lyst 7.0 8
WI-7199 258-272 R 1q34-1q43 NID 13 Nid 7.0 a, b 8
1 RYR2 13 Ryr2 4.0 8

TTTP Homology Mapping Methods

Method Description
C High-resolution cytogenetic methods
G Genetic linkage mapping
G* Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
L Long-range restriction site mapping
P Multiple physical methods, including YAC and cosmid contigs
R Radiation hybrid mapping
X Multiple sources of high-resolution data

Gene Notes:

Key Description
a Gene Bank Accession Number for Mouse EST
b Gene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
g Mouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
y Position has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
p Different sources of high resolution mapping data give conflicting positions
r Difference between position in inbred mice vs. Mus spretus
u This is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

 

Color Key for Homology Map

Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr. Mouse Chr.
1 2 3 4 5 6
7 8 9 10 11 12
13 14 15 16 17 18
19 20 21 22 X